Transcript: SCML4-006 OTTHUMT00000041701.2

Description

sex comb on midleg-like 4 (Drosophila)

Location

Chromosome 6: 107,740,065-107,824,286 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000015313 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SCML4-008	OTTHUMT00000318241.1	2377	356aa	OTTHUMP00000197438	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS69163	-
SCML4-002	OTTHUMT00000041697.3	1534	172aa	OTTHUMP00000016932	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75500	-
SCML4-005	OTTHUMT00000041700.4	1491	414aa	OTTHUMP00000016934	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5060	Q8N228
SCML4-007	OTTHUMT00000041702.2	700	198aa	OTTHUMP00000016936	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SCML4-006	OTTHUMT00000041701.2	779	171aa	OTTHUMP00000016935	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SCML4-003	OTTHUMT00000041698.1	398	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SCML4-001	OTTHUMT00000041696.2	4297	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SCML4-010	OTTHUMT00000318243.1	2679	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SCML4-009	OTTHUMT00000318242.1	1964	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SCML4-004	OTTHUMT00000041699.2	1112	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 779 bps Translation length: 171 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 31/07/2002)

Alternative symbols

RP1-47M23.1-006

Other assemblies

This transcript maps to 107,740,065-107,824,286 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000426221

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SCML4-006 OTTHUMT00000041701.2

Summary

Transcript-based displays