Transcript: ATG5-007 OTTHUMT00000489482.1

Description

ATG5 autophagy related 5 homolog (S. cerevisiae)

Location

Chromosome 6: 106,045,423-106,325,762 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000016193 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
ATG5-001	OTTHUMT00000043476.2	3216	275aa	OTTHUMP00000017823	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5055	Q9H1Y0
ATG5-002	OTTHUMT00000043477.1	3092	275aa	OTTHUMP00000017824	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5055	Q9H1Y0
ATG5-009	OTTHUMT00000491563.1	3035	197aa	OTTHUMP00000283303	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS69159	-
ATG5-008	OTTHUMT00000491562.1	2712	91aa	OTTHUMP00000283302	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75498	-
ATG5-007	OTTHUMT00000489482.1	2261	153aa	OTTHUMP00000282090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GV54
ATG5-003	OTTHUMT00000043478.2	3088	44aa	OTTHUMP00000017825	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	L7UMD8
ATG5-006	OTTHUMT00000489483.1	1219	159aa	OTTHUMP00000282091	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GUS1
ATG5-005	OTTHUMT00000043480.1	2659	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATG5-004	OTTHUMT00000043479.2	602	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,261 bps Translation length: 153 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 26/11/2015 (Created on 26/11/2015)

Alternative symbols

RP1-134E15.2-007

Annotation Attributes

RNA-Seq supported only [Definitions]

Other assemblies

This transcript maps to 106,045,423-106,325,762 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000636437

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ATG5-007 OTTHUMT00000489482.1

Summary

Transcript-based displays