Transcript: HMGB1-007 OTTHUMT00000044362.1

Description

high mobility group box 1

Location

Chromosome 13: 30,463,311-30,465,914 reverse strand.

About this transcript

This transcript has 2 exons.

Gene

This transcript is a product of gene OTTHUMG00000016670 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
HMGB1-004	OTTHUMT00000044359.3	5485	215aa	OTTHUMP00000018199	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-012	OTTHUMT00000303998.2	4199	215aa	OTTHUMP00000200117	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-001	OTTHUMT00000044356.3	2319	215aa	OTTHUMP00000018196	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-011	OTTHUMT00000303982.1	1282	215aa	OTTHUMP00000190860	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9335	P09429
HMGB1-009	OTTHUMT00000303980.1	1727	158aa	OTTHUMP00000190859	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5T7C4
HMGB1-003	OTTHUMT00000044358.1	821	158aa	OTTHUMP00000018198	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5T7C4
HMGB1-010	OTTHUMT00000303981.1	2197	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
HMGB1-007	OTTHUMT00000044362.1	503	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HMGB1-008	OTTHUMT00000044363.1	425	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 2 Transcript length: 503 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 17/11/2003)

Alternative symbols

RP11-550P23.1-007

Remarks

high mobility group box 1 (HMG1, HMG3)

this variant and variant 5 could be part of the same variant

Other assemblies

This transcript maps to 30,463,311-30,465,914 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000468384

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HMGB1-007 OTTHUMT00000044362.1

Summary

Transcript-based displays