Transcript: ASAH2-004 OTTHUMT00000346922.2

Description

N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2

Location

About this transcript

This transcript has 4 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ASAH2-001	OTTHUMT00000048061.3	6880	780aa	OTTHUMP00000019606	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7239	Q9NR71
ASAH2-003	OTTHUMT00000346921.1	2184	726aa	OTTHUMP00000211204	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ASAH2-004	OTTHUMT00000346922.2	539	144aa	OTTHUMP00000274484	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ASAH2-002	OTTHUMT00000346920.1	1360	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ASAH2-005	OTTHUMT00000346923.2	555	51aa	OTTHUMP00000274485	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 4 Transcript length: 539 bps Translation length: 144 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 10/02/2009)

Alternative symbols

RP11-56A21.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 50,187,211-50,199,146 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000489640

Curation Method

Manual annotation from Havana