Transcript: PSAP-005 OTTHUMT00000487869.2

Description

prosaposin

Location

About this transcript

This transcript has 6 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PSAP-001	OTTHUMT00000048553.2	2872	524aa	OTTHUMP00000019776	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7311	A0A024QZQ2
PSAP-005	OTTHUMT00000487869.2	500	167aa	OTTHUMP00000281057	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YXB8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PSAP-002	OTTHUMT00000048554.4	1681	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PSAP-003	OTTHUMT00000048555.1	576	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PSAP-004	OTTHUMT00000048556.1	344	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 500 bps Translation length: 167 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 28/01/2015)

Alternative symbols

RP11-472K8.1-005

Annotation Attributes

dotter confirmed [Definitions]

not organism-supported

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 71,819,816-71,828,134 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000633965

Curation Method

Manual annotation from Havana