Transcript: ARHGAP19-002 OTTHUMT00000049646.3

Description

Rho GTPase activating protein 19

Location

Chromosome 10: 97,225,309-97,270,664 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000018845 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARHGAP19-003	OTTHUMT00000049647.2	5463	494aa	OTTHUMP00000020189	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7454	Q14CB8
ARHGAP19-002	OTTHUMT00000049646.3	2301	485aa	OTTHUMP00000020188	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58092	-
ARHGAP19-006	OTTHUMT00000049650.3	601	197aa	OTTHUMP00000272303	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	R4GNI4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ARHGAP19-001	OTTHUMT00000049645.5	1900	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ARHGAP19-004	OTTHUMT00000049648.2	5525	300aa	OTTHUMP00000272302	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	R4GMS4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARHGAP19-005	OTTHUMT00000049649.1	4553	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARHGAP19-007	OTTHUMT00000467775.1	812	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,301 bps Translation length: 485 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58092

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 04/12/2003)

Alternative symbols

RP11-375N9.3-002

Remarks

novel protein (MGC14258), variant 2 (FLJ36122)

Other assemblies

This transcript maps to 97,225,309-97,270,664 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000371027

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ARHGAP19-002 OTTHUMT00000049646.3

Summary

Transcript-based displays