Transcript: PSMD5-002 OTTHUMT00000053826.3

Description

proteasome (prosome, macropain) 26S subunit, non-ATPase, 5

Location

About this transcript

This transcript has 3 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PSMD5-001	OTTHUMT00000053825.2	3443	504aa	OTTHUMP00000021990	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6824	Q16401
PSMD5-007	OTTHUMT00000470012.1	1538	461aa	OTTHUMP00000273179	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS59143	-
PSMD5-003	OTTHUMT00000053827.2	569	113aa	OTTHUMP00000021992	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q4VXH0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PSMD5-002	OTTHUMT00000053826.3	382	72aa	OTTHUMP00000021991	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F2Z3J2
PSMD5-004	OTTHUMT00000053828.1	686	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PSMD5-006	OTTHUMT00000053830.1	567	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PSMD5-005	OTTHUMT00000053829.1	384	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 382 bps Translation length: 72 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 11/12/2003)

Alternative symbols

RP11-27I1.5-002

Remarks

proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 (S5B, KIAA0072, MGC23145)

Other assemblies

This transcript maps to 120,831,367-120,842,911 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000476949

Curation Method

Manual annotation from Havana