Description
GTPase activating Rap/RanGAP domain-like 3
Location
Chromosome 9: 127,224,539-127,320,778 forward strand.
About this transcript
This transcript has 7 exons and is annotated with 2 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000020700 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
GARNL3-003 | OTTHUMT00000054151.3 | 3800 | 1013aa | OTTHUMP00000022171 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6869 | Q5VVW2 | |
GARNL3-005 | OTTHUMT00000054153.2 | 905 | 267aa | OTTHUMP00000022172 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5JS19 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
GARNL3-012 | OTTHUMT00000054160.3 | 831 | 167aa | OTTHUMP00000211610 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J8L5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
GARNL3-016 | OTTHUMT00000347712.2 | 667 | 139aa | OTTHUMP00000211605 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
GARNL3-009 | OTTHUMT00000054157.3 | 523 | 110aa | OTTHUMP00000211608 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
GARNL3-023 | OTTHUMT00000470969.1 | 2627 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
GARNL3-002 | OTTHUMT00000054150.3 | 2528 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
GARNL3-001 | OTTHUMT00000347709.1 | 3143 | 802aa | OTTHUMP00000211604 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0C4DFW0 | |
GARNL3-011 | OTTHUMT00000054159.4 | 694 | 88aa | OTTHUMP00000211609 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
GARNL3-018 | OTTHUMT00000347714.2 | 653 | 48aa | OTTHUMP00000211607 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
GARNL3-022 | OTTHUMT00000347720.2 | 569 | 81aa | OTTHUMP00000273197 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
GARNL3-017 | OTTHUMT00000347713.2 | 536 | 48aa | OTTHUMP00000211606 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
GARNL3-004 | OTTHUMT00000054152.1 | 1859 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
GARNL3-020 | OTTHUMT00000347716.1 | 578 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
GARNL3-019 | OTTHUMT00000347715.1 | 577 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
GARNL3-021 | OTTHUMT00000347717.1 | 554 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
GARNL3-015 | OTTHUMT00000347718.2 | 549 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
GARNL3-006 | OTTHUMT00000054154.1 | 488 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
GARNL3-013 | OTTHUMT00000347710.1 | 4816 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
GARNL3-010 | OTTHUMT00000054158.1 | 887 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
GARNL3-007 | OTTHUMT00000054155.1 | 737 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
GARNL3-014 | OTTHUMT00000347719.1 | 639 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
GARNL3-008 | OTTHUMT00000054156.1 | 304 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |