Transcript: UPF3B-004 OTTHUMT00000489200.1

Description

UPF3 regulator of nonsense transcripts homolog B (yeast)

Location

About this transcript

This transcript has 7 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
UPF3B-001	OTTHUMT00000058068.2	2378	483aa	OTTHUMP00000023923	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14588	Q9BZI7
UPF3B-002	OTTHUMT00000058069.2	2335	470aa	OTTHUMP00000023924	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14587	-
UPF3B-004	OTTHUMT00000489200.1	834	232aa	OTTHUMP00000281884	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
UPF3B-003	OTTHUMT00000058070.1	748	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 834 bps Translation length: 232 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 26/10/2015 (Created on 26/10/2015)

Alternative symbols

RP3-327A19.3-004

Remarks

non canonical TEC

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 119,805,311-119,837,932 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000636792

Curation Method

Manual annotation from Havana