Transcript: SYNGR1-003 OTTHUMT00000259133.2

Description

synaptogyrin 1

Location

About this transcript

This transcript has 4 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SYNGR1-001	OTTHUMT00000075866.2	4391	233aa	OTTHUMP00000028972	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13989	O43759
SYNGR1-002	OTTHUMT00000259132.2	1361	191aa	OTTHUMP00000165911	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13990	-
SYNGR1-005	OTTHUMT00000259135.2	1295	192aa	OTTHUMP00000165912	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13991	-
SYNGR1-007	OTTHUMT00000321215.1	564	169aa	OTTHUMP00000199080	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B5MCD7
SYNGR1-006	OTTHUMT00000259136.1	497	118aa	OTTHUMP00000165913	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2A283
SYNGR1-003	OTTHUMT00000259133.2	928	144aa	OTTHUMP00000199081	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WCE4
SYNGR1-004	OTTHUMT00000259134.1	1999	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 928 bps Translation length: 144 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 18/04/2006)

Alternative symbols

RP3-333H23.3-003

Other assemblies

This transcript maps to 39,349,987-39,377,911 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000415332

Curation Method

Manual annotation from Havana