Transcript: HLA-C-002 OTTHUMT00000258079.1

Description

major histocompatibility complex, class I, C

Location

Chromosome 6: 31,268,749-31,272,086 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000031154 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HLA-C-001	OTTHUMT00000076281.3	1536	366aa	OTTHUMP00000029213	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34393	Q6R739
HLA-C-002	OTTHUMT00000258079.1	1554	372aa	OTTHUMP00000165154	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2AEA2
HLA-C-007	OTTHUMT00000258083.2	782	261aa	OTTHUMP00000165156	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
HLA-C-006	OTTHUMT00000258924.2	1538	131aa	OTTHUMP00000205657	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
HLA-C-005	OTTHUMT00000258081.3	1880	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HLA-C-010	OTTHUMT00000258086.1	1279	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HLA-C-008	OTTHUMT00000258084.3	1073	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HLA-C-012	OTTHUMT00000258082.1	862	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HLA-C-011	OTTHUMT00000258087.1	754	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,554 bps Translation length: 372 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 24/03/2006)

Alternative symbols

XXbac-BPG248L24.3-002

Remarks

Q95604.1

Other assemblies

This transcript maps to 31,268,749-31,272,086 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000383329

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HLA-C-002 OTTHUMT00000258079.1

Summary

Transcript-based displays