Transcript: HLA-DOA-001 OTTHUMT00000076426.2

Description

major histocompatibility complex, class II, DO alpha

Location

About this transcript

This transcript has 5 exons and is annotated with 15 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HLA-DOA-001	OTTHUMT00000076426.2	3489	250aa	OTTHUMP00000029303	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4763	P06340
HLA-DOA-003	OTTHUMT00000076430.2	303	86aa	OTTHUMP00000029306	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HLA-DOA-006	OTTHUMT00000276555.1	545	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HLA-DOA-002	OTTHUMT00000076427.2	472	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HLA-DOA-005	OTTHUMT00000076429.2	402	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HLA-DOA-004	OTTHUMT00000076428.2	596	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 3,489 bps Translation length: 250 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4763

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 23/01/2004)

Alternative symbols

XXbac-BPG138A21.3-001

Other assemblies

This transcript maps to 33,004,178-33,009,612 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000229829

Curation Method

Manual annotation from Havana