Transcript: LY6G5C-004 OTTHUMT00000127863.2

Description

lymphocyte antigen 6 complex, locus G5C

Location

About this transcript

This transcript has 3 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LY6G5C-003	OTTHUMT00000076473.4	674	150aa	OTTHUMP00000063241	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34401	Q5SRR4
LY6G5C-001	OTTHUMT00000076472.7	950	225aa	OTTHUMP00000029336	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LY6G5C-004	OTTHUMT00000127863.2	538	69aa	OTTHUMP00000215171	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WBQ4
LY6G5C-008	OTTHUMT00000127866.2	836	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LY6G5C-002	OTTHUMT00000076471.5	666	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LY6G5C-007	OTTHUMT00000268010.1	369	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LY6G5C-005	OTTHUMT00000127864.1	1428	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 538 bps Translation length: 69 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 19/10/2004)

Alternative symbols

XXbac-BPG32J3.2-004

Other assemblies

This transcript maps to 31,676,957-31,680,364 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000474678

Curation Method

Manual annotation from Havana