Transcript: KCNB1-002 OTTHUMT00000488255.1

Description

potassium voltage-gated channel, Shab-related subfamily, member 1

Location

Chromosome 20: 49,371,968-49,484,297 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 46 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000033051 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
KCNB1-001	OTTHUMT00000080374.5	11879	858aa	OTTHUMP00000031697	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13418	Q14721
KCNB1-002	OTTHUMT00000488255.1	4114	858aa	OTTHUMP00000281342	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13418	Q14721
KCNB1-010	OTTHUMT00000490839.1	173	42aa	OTTHUMP00000282860	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GU02	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
KCNB1-003	OTTHUMT00000488256.1	2780	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
KCNB1-006	OTTHUMT00000490419.2	1050	40aa	OTTHUMP00000282689	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
KCNB1-005	OTTHUMT00000490418.2	5331	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
KCNB1-004	OTTHUMT00000488257.1	336	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
KCNB1-008	OTTHUMT00000490841.1	186	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
KCNB1-009	OTTHUMT00000490840.1	172	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
KCNB1-007	OTTHUMT00000490842.1	170	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 3 Transcript length: 4,114 bps Translation length: 858 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13418

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/04/2015 (Created on 28/04/2015)

Alternative symbols

RP4-791K14.1-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 49,371,968-49,484,297 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000635465

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: KCNB1-002 OTTHUMT00000488255.1

Summary

Transcript-based displays