Transcript: TSEN15-006 OTTHUMT00000382436.1

Description

tRNA splicing endonuclease 15 homolog (S. cerevisiae)

Location

Chromosome 1: 184,051,746-184,074,206 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000035461 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TSEN15-001	OTTHUMT00000086132.1	1960	171aa	OTTHUMP00000033516	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1361	B1ALV0
TSEN15-006	OTTHUMT00000382436.1	1743	129aa	OTTHUMP00000228761	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44286	-
TSEN15-007	OTTHUMT00000382435.1	618	134aa	OTTHUMP00000228760	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS72993	E9PPN1
TSEN15-003	OTTHUMT00000086134.2	1628	136aa	OTTHUMP00000228762	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YCV5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TSEN15-002	OTTHUMT00000086133.3	806	119aa	OTTHUMP00000228759	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F2Z3M0
TSEN15-005	OTTHUMT00000098689.2	573	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TSEN15-004	OTTHUMT00000098688.1	417	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,743 bps Translation length: 129 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44286

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 22/04/2010)

Alternative symbols

GS1-215N23.1-006

Other assemblies

This transcript maps to 184,051,746-184,074,206 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000423085

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TSEN15-006 OTTHUMT00000382436.1

Summary

Transcript-based displays