Transcript: SNX15-003 OTTHUMT00000385897.1

Description

sorting nexin 15

Location

Chromosome 11: 65,027,540-65,040,570 forward strand.

About this transcript

This transcript has 7 exons.

Gene

This transcript is a product of gene OTTHUMG00000037387 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SNX15-001	OTTHUMT00000091004.3	1939	342aa	OTTHUMP00000035515	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8089	Q9NRS6
SNX15-002	OTTHUMT00000385882.3	771	256aa	OTTHUMP00000230789	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8090	-
SNX15-004	OTTHUMT00000385972.1	704	217aa	OTTHUMP00000230840	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PMW6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SNX15-006	OTTHUMT00000385973.2	627	192aa	OTTHUMP00000230841	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PK26	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SNX15-007	OTTHUMT00000385974.2	312	66aa	OTTHUMP00000230842	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SNX15-005	OTTHUMT00000385971.1	573	114aa	OTTHUMP00000230839	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SNX15-003	OTTHUMT00000385897.1	4713	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 4,713 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 25/05/2010)

Alternative symbols

AP000436.1-003

Other assemblies

This transcript maps to 65,027,540-65,040,570 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000526702

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SNX15-003 OTTHUMT00000385897.1

Summary

Transcript-based displays