Transcript: SAMD11-001 OTTHUMT00000097860.4

Description

sterile alpha motif domain containing 11

Location

Chromosome 1: 930,312-944,575 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000040719 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SAMD11-010	OTTHUMT00000276866.2	2551	681aa	OTTHUMP00000178963	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2	Q96NU1
SAMD11-001	OTTHUMT00000097860.4	2191	589aa	OTTHUMP00000038427	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SAMD11-004	OTTHUMT00000097863.4	1731	541aa	OTTHUMP00000038430	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SAMD11-011	OTTHUMT00000316521.3	1578	358aa	OTTHUMP00000196421	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A6PWC8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SAMD11-003	OTTHUMT00000097862.5	387	109aa	OTTHUMP00000038429	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5SV95	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SAMD11-006	OTTHUMT00000097865.2	318	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SAMD11-007	OTTHUMT00000097866.1	862	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SAMD11-009	OTTHUMT00000097868.2	657	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SAMD11-008	OTTHUMT00000097867.2	542	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,191 bps Translation length: 589 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 27/02/2014 (Created on 28/05/2004)

Alternative symbols

RP11-54O7.4-001

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 930,312-944,575 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000341065

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: SAMD11-001 OTTHUMT00000097860.4

Summary

Transcript-based displays