Transcript: KCNA1-004 OTTHUMT00000492471.1

Description

potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)

Location

About this transcript

This transcript has 3 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
KCNA1-001	OTTHUMT00000103343.3	7997	495aa	OTTHUMP00000041572	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8535	Q09470
KCNA1-004	OTTHUMT00000492471.1	578	38aa	OTTHUMP00000283849	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
KCNA1-002	OTTHUMT00000492470.1	2618	441aa	OTTHUMP00000283848	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
KCNA1-003	OTTHUMT00000398923.4	506	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 3 Transcript length: 578 bps Translation length: 38 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 14/09/2016 (Created on 14/09/2016)

Alternative symbols

AC006063.1-004

Annotation Attributes

RNA-Seq supported only [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 4,912,191-4,918,204 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000639680

Curation Method

Manual annotation from Havana