Transcript: JMJD7-PLA2G4B-001 OTTHUMT00000103522.2

Description

JMJD7-PLA2G4B readthrough transcript

Location

About this transcript

This transcript has 25 exons and is annotated with 23 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
JMJD7-PLA2G4B-001	OTTHUMT00000103522.2	3331	1012aa	OTTHUMP00000041703	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32202
JMJD7-PLA2G4B-002	OTTHUMT00000326088.1	2966	893aa	OTTHUMP00000201605	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55961
JMJD7-PLA2G4B-006	OTTHUMT00000326085.1	3178	81aa	OTTHUMP00000220477	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
JMJD7-PLA2G4B-003	OTTHUMT00000326091.2	577	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
JMJD7-PLA2G4B-004	OTTHUMT00000103523.3	7227	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
JMJD7-PLA2G4B-005	OTTHUMT00000326084.3	7218	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 25 Transcript length: 3,331 bps Translation length: 1,012 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32202

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 17/07/2002)

Alternative symbols

RP11-23P13.2-001

Annotation Attributes

readthrough [Definitions]

Remarks

NP_005081.1

Other assemblies

This transcript maps to 41,828,116-41,848,143 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000382448

Curation Method

Manual annotation from Havana