Transcript: CYP27A1-004 OTTHUMT00000336559.1

Description

cytochrome P450, family 27, subfamily A, polypeptide 1

Location

About this transcript

This transcript has 5 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CYP27A1-001	OTTHUMT00000109734.4	2286	531aa	OTTHUMP00000045925	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2423	Q02318
CYP27A1-005	OTTHUMT00000336560.3	799	221aa	OTTHUMP00000206396	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J1K5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CYP27A1-004	OTTHUMT00000336559.1	903	115aa	OTTHUMP00000206395	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CYP27A1-002	OTTHUMT00000336557.1	2566	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CYP27A1-003	OTTHUMT00000336558.1	1210	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 903 bps Translation length: 115 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 23/09/2008)

Alternative symbols

AC009974.1-004

Other assemblies

This transcript maps to 218,782,153-218,814,067 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000445971

Curation Method

Manual annotation from Havana