Transcript: HJURP-001 OTTHUMT00000130996.6

Description

Holliday junction recognition protein

Location

Chromosome 2: 233,836,703-233,854,566 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 13 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000059125 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HJURP-001	OTTHUMT00000130996.6	3187	748aa	OTTHUMP00000065202	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33406	Q8NCD3
HJURP-007	OTTHUMT00000321850.2	1776	570aa	OTTHUMP00000199445	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JWC4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HJURP-002	OTTHUMT00000130997.2	806	268aa	OTTHUMP00000065203	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
HJURP-004	OTTHUMT00000130999.2	367	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
HJURP-005	OTTHUMT00000131000.3	823	68aa	OTTHUMP00000202772	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HJURP-006	OTTHUMT00000317137.1	634	122aa	OTTHUMP00000199446	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WCV1
HJURP-008	OTTHUMT00000328699.2	385	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HJURP-003	OTTHUMT00000130998.1	467	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 3,187 bps Translation length: 748 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33406

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 6, last modified on 28/02/2014 (Created on 25/11/2004)

Alternative symbols

AC005538.1-001

Remarks

FLJ90328

Other assemblies

This transcript maps to 233,836,703-233,854,566 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000411486

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HJURP-001 OTTHUMT00000130996.6

Summary

Transcript-based displays