Transcript: HPCAL1-004 OTTHUMT00000323535.3

Description

hippocalcin-like 1

Location

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HPCAL1-002	OTTHUMT00000206898.1	1904	193aa	OTTHUMP00000115514	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1671	Q6FGY1
HPCAL1-001	OTTHUMT00000206897.2	1751	193aa	OTTHUMP00000115513	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1671	Q6FGY1
HPCAL1-005	OTTHUMT00000323536.2	587	103aa	OTTHUMP00000200385	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BZC1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HPCAL1-004	OTTHUMT00000323535.3	586	30aa	OTTHUMP00000200384	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JW46	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HPCAL1-003	OTTHUMT00000323534.2	4781	175aa	OTTHUMP00000200383	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PC71

Summary

Statistics

Exons: 4 Transcript length: 586 bps Translation length: 30 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 18/08/2015 (Created on 18/01/2008)

Alternative symbols

AC007249.1-004

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 10,302,889-10,419,847 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000423674

Curation Method

Manual annotation from Havana