Transcript: EPCAM-001 OTTHUMT00000250792.2

Description

epithelial cell adhesion molecule

Location

About this transcript

This transcript has 9 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
EPCAM-001	OTTHUMT00000250792.2	1724	314aa	OTTHUMP00000159073	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1833	P16422
EPCAM-002	OTTHUMT00000323354.4	1530	342aa	OTTHUMP00000200307	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B5MCA4
EPCAM-006	OTTHUMT00000323641.2	609	199aa	OTTHUMP00000200427	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
EPCAM-003	OTTHUMT00000323638.1	1501	342aa	OTTHUMP00000200426	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	B5MCA4
EPCAM-005	OTTHUMT00000323640.1	752	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
EPCAM-004	OTTHUMT00000323639.1	714	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,724 bps Translation length: 314 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS1833

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/02/2014 (Created on 25/10/2005)

Alternative symbols

AC079775.1-001

Other assemblies

This transcript maps to 47,369,148-47,387,034 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000263735

Curation Method

Manual annotation from Havana