Transcript: YKT6-001 OTTHUMT00000251125.2

Description

YKT6 v-SNARE homolog (S. cerevisiae)

Location

About this transcript

This transcript has 7 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
YKT6-001	OTTHUMT00000251125.2	2696	198aa	OTTHUMP00000159348	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5482	O15498
YKT6-002	OTTHUMT00000343171.1	1270	164aa	OTTHUMP00000209267	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
YKT6-007	OTTHUMT00000343176.1	673	29aa	OTTHUMP00000209269	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
YKT6-004	OTTHUMT00000343173.2	1085	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
YKT6-006	OTTHUMT00000343175.1	366	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
YKT6-003	OTTHUMT00000343172.1	2463	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
YKT6-005	OTTHUMT00000343174.1	608	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,696 bps Translation length: 198 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5482

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 31/10/2005)

Alternative symbols

AC006454.8-001

Other assemblies

This transcript maps to 44,201,049-44,214,294 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000223369

Curation Method

Manual annotation from Havana