Transcript: TYW1-002 OTTHUMT00000346619.2

Description

tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)

Location

Chromosome 7: 66,996,853-67,239,512 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000129723 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TYW1-001	OTTHUMT00000251932.2	3348	732aa	OTTHUMP00000160137	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5538	Q9NV66
TYW1-010	OTTHUMT00000346627.2	563	134aa	OTTHUMP00000211031	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J9Q4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TYW1-003	OTTHUMT00000346620.1	1601	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TYW1-002	OTTHUMT00000346619.2	3255	384aa	OTTHUMP00000211027	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TYW1-009	OTTHUMT00000346626.1	495	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TYW1-007	OTTHUMT00000346624.1	1302	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TYW1-011	OTTHUMT00000346628.1	574	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 3,255 bps Translation length: 384 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 04/02/2009)

Alternative symbols

AC006480.6-002

Other assemblies

This transcript maps to 66,996,853-67,239,512 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000361660

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TYW1-002 OTTHUMT00000346619.2

Summary

Transcript-based displays