Transcript: LGALS9B-003 OTTHUMT00000443760.1

Description

lectin, galactoside-binding, soluble, 9B

Location

About this transcript

This transcript has 3 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LGALS9B-001	OTTHUMT00000253230.2	1713	356aa	OTTHUMP00000161300	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3B8N2
LGALS9B-002	OTTHUMT00000443757.1	1115	35aa	OTTHUMP00000260253	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LGALS9B-003	OTTHUMT00000443760.1	375	51aa	OTTHUMP00000260254	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LGALS9B-004	OTTHUMT00000443759.1	564	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LGALS9B-005	OTTHUMT00000443758.1	492	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 375 bps Translation length: 51 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 30/01/2012)

Alternative symbols

AC025627.11-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 20,456,561-20,458,260 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000584703

Curation Method

Manual annotation from Havana