Transcript: DLEC1-005 OTTHUMT00000342606.2

Description

deleted in lung and esophageal cancer 1

Location

About this transcript

This transcript has 6 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
DLEC1-001	OTTHUMT00000253745.3	6426	1755aa	OTTHUMP00000161720	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2672	Q9Y238
DLEC1-005	OTTHUMT00000342606.2	533	82aa	OTTHUMP00000209818	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	Q32W76	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
DLEC1-004	OTTHUMT00000342605.1	220	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
DLEC1-002	OTTHUMT00000342524.3	3457	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
DLEC1-007	OTTHUMT00000342608.2	2841	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
DLEC1-008	OTTHUMT00000342610.1	533	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 533 bps Translation length: 82 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 25/11/2008)

Alternative symbols

AP006309.2-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 38,062,746-38,095,941 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000447130

Curation Method

Manual annotation from Havana