Transcript: GDPD3-004 OTTHUMT00000434055.2

Description

glycerophosphodiester phosphodiesterase domain containing 3

Location

About this transcript

This transcript has 3 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GDPD3-001	OTTHUMT00000255144.1	1397	318aa	OTTHUMP00000162982	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10671	Q7L5L3
GDPD3-005	OTTHUMT00000434056.1	235	47aa	OTTHUMP00000255251	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GDPD3-004	OTTHUMT00000434055.2	399	41aa	OTTHUMP00000255250	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BPX3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GDPD3-002	OTTHUMT00000434054.1	1306	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
GDPD3-003	OTTHUMT00000434053.1	486	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 399 bps Translation length: 41 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2014 (Created on 15/09/2011)

Alternative symbols

AC025279.9-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 30,104,815-30,108,432 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000566434

Curation Method

Manual annotation from Havana