Transcript: TRIM65-001 OTTHUMT00000255170.2

Description

tripartite motif-containing 65

Location

Chromosome 17: 75,888,960-75,897,003 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000132127 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TRIM65-001	OTTHUMT00000255170.2	3439	517aa	OTTHUMP00000163003	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11732	Q6PJ69
TRIM65-005	OTTHUMT00000396167.1	886	244aa	OTTHUMP00000236785	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YGS7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TRIM65-003	OTTHUMT00000396166.2	865	288aa	OTTHUMP00000236784	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
TRIM65-007	OTTHUMT00000448942.1	644	137aa	OTTHUMP00000262958	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TRIM65-008	OTTHUMT00000448943.1	396	90aa	OTTHUMP00000262959	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TRIM65-002	OTTHUMT00000396165.1	1877	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TRIM65-004	OTTHUMT00000396168.1	385	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 3,439 bps Translation length: 517 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11732

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 23/07/2014 (Created on 23/12/2005)

Alternative symbols

AC087749.1-001

Other assemblies

This transcript maps to 75,888,960-75,897,003 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000269383

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TRIM65-001 OTTHUMT00000255170.2

Summary

Transcript-based displays