Transcript: SPATA3-007 OTTHUMT00000333441.1

Description

spermatogenesis associated 3

Location

Chromosome 2: 230,996,389-231,007,284 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000133221 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SPATA3-001	OTTHUMT00000256956.2	1618	192aa	OTTHUMP00000204865	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2481	Q8NHX4
SPATA3-002	OTTHUMT00000333436.1	1011	192aa	OTTHUMP00000204858	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2481	Q8NHX4
SPATA3-003	OTTHUMT00000333437.1	856	192aa	OTTHUMP00000204859	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2481	Q8NHX4
SPATA3-008	OTTHUMT00000333442.2	766	192aa	OTTHUMP00000204864	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2481	Q8NHX4
SPATA3-007	OTTHUMT00000333441.1	433	87aa	OTTHUMP00000204863	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C3E6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SPATA3-009	OTTHUMT00000333735.2	423	6aa	OTTHUMP00000232513	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SPATA3-006	OTTHUMT00000333440.1	406	104aa	OTTHUMP00000204862	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C283	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SPATA3-004	OTTHUMT00000333438.1	332	37aa	OTTHUMP00000204860	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SPATA3-005	OTTHUMT00000333439.2	436	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 433 bps Translation length: 87 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 31/07/2008)

Alternative symbols

AC105344.1-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 230,996,389-231,007,284 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000423134

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SPATA3-007 OTTHUMT00000333441.1

Summary

Transcript-based displays