Transcript: ZNF550-001 OTTHUMT00000257992.3

Description

zinc finger protein 550

Location

About this transcript

This transcript has 5 exons and is annotated with 46 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ZNF550-001	OTTHUMT00000257992.3	3376	422aa	OTTHUMP00000271769	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35500	Q7Z398
ZNF550-004	OTTHUMT00000466784.1	3485	339aa	OTTHUMP00000271772	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0QWZ8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ZNF550-007	OTTHUMT00000470213.1	1361	381aa	OTTHUMP00000273301	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0C4DGB4
ZNF550-006	OTTHUMT00000466783.1	515	125aa	OTTHUMP00000271768	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0R337
ZNF550-003	OTTHUMT00000277057.2	4305	422aa	OTTHUMP00000271771	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS35500	Q7Z398
ZNF550-002	OTTHUMT00000277056.3	3719	422aa	OTTHUMP00000271770	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS35500	Q7Z398
ZNF550-005	OTTHUMT00000466785.1	565	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 3,376 bps Translation length: 422 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS35500

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 14/03/2006)

Alternative symbols

AC003682.8-001

Remarks

NMD exception

Other assemblies

This transcript maps to 57,541,836-57,559,863 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000457177

Curation Method

Manual annotation from Havana