Transcript: PPP1CB-005 OTTHUMT00000324845.4

Description

protein phosphatase 1, catalytic subunit, beta isoform

Location

Chromosome 2: 28,751,739-28,779,039 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000152011 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PPP1CB-001	OTTHUMT00000324841.1	4893	327aa	OTTHUMP00000200967	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33169	V9HW04
PPP1CB-003	OTTHUMT00000324843.1	3527	327aa	OTTHUMP00000200968	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33169	V9HW04
PPP1CB-004	OTTHUMT00000324844.5	721	169aa	OTTHUMP00000200969	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7ETD8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PPP1CB-005	OTTHUMT00000324845.4	584	138aa	OTTHUMP00000200970	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JP48	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PPP1CB-006	OTTHUMT00000324846.2	570	125aa	OTTHUMP00000200971	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J9S3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PPP1CB-009	OTTHUMT00000324849.1	281	82aa	OTTHUMP00000200973	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y3Y6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PPP1CB-002	OTTHUMT00000324842.1	2893	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PPP1CB-008	OTTHUMT00000324848.1	569	64aa	OTTHUMP00000200972	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PPP1CB-007	OTTHUMT00000324847.1	577	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 584 bps Translation length: 138 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 09/07/2015 (Created on 14/02/2008)

Alternative symbols

AC097724.4-005

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 28,751,739-28,779,039 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000441461

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: PPP1CB-005 OTTHUMT00000324845.4

Summary

Transcript-based displays