Transcript: AVL9-002 OTTHUMT00000328642.1

Description

AVL9 homolog (S. cerevisiase)

Location

Chromosome 7: 32,543,255-32,588,711 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000152929 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AVL9-003	OTTHUMT00000328643.1	6982	648aa	OTTHUMP00000202742	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34613	Q8NBF6
AVL9-002	OTTHUMT00000328642.1	6372	568aa	OTTHUMP00000202741	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AVL9-001	OTTHUMT00000328641.1	4336	630aa	OTTHUMP00000202740	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
AVL9-004	OTTHUMT00000328644.1	7937	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AVL9-005	OTTHUMT00000328645.1	489	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AVL9-006	OTTHUMT00000328646.1	677	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AVL9-007	OTTHUMT00000328647.1	543	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AVL9-008	OTTHUMT00000328648.1	531	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 6,372 bps Translation length: 568 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 15/05/2008)

Alternative symbols

AC018633.3-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 32,543,255-32,588,711 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000446718

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: AVL9-002 OTTHUMT00000328642.1

Summary

Transcript-based displays