Transcript: CCDC154-002 OTTHUMT00000333888.2

Description

coiled-coil domain containing 154

Location

About this transcript

This transcript has 6 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
CCDC154-001	OTTHUMT00000333887.2	2561	522aa	OTTHUMP00000205075	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
CCDC154-004	OTTHUMT00000432504.1	1834	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
CCDC154-002	OTTHUMT00000333888.2	708	99aa	OTTHUMP00000254500	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CCDC154-003	OTTHUMT00000333889.2	469	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 6 Transcript length: 708 bps Translation length: 99 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 08/08/2008)

Alternative symbols

LA16c-312E8.1-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 1,434,383-1,437,903 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000483702

Curation Method

Manual annotation from Havana