Transcript: SUGCT-008 OTTHUMT00000338395.2

Description

succinyl-CoA:glutarate-CoA transferase

Location

Chromosome 7: 40,135,001-40,194,975 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000155094 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SUGCT-001	OTTHUMT00000338388.1	1645	445aa	OTTHUMP00000207229	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55105	Q9HAC7
SUGCT-009	OTTHUMT00000484449.1	1591	471aa	OTTHUMP00000279382	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55104	-
SUGCT-003	OTTHUMT00000338390.1	1369	397aa	OTTHUMP00000207231	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55106	-
SUGCT-002	OTTHUMT00000338389.1	1593	421aa	OTTHUMP00000207230	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y4N1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SUGCT-004	OTTHUMT00000338391.4	539	180aa	OTTHUMP00000207232	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C0H3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SUGCT-008	OTTHUMT00000338395.2	367	49aa	OTTHUMP00000207233	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SUGCT-005	OTTHUMT00000338392.1	509	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SUGCT-007	OTTHUMT00000338394.1	500	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SUGCT-006	OTTHUMT00000338393.1	452	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 367 bps Translation length: 49 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 17/10/2008)

Alternative symbols

AC005160.2-008

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 40,135,001-40,194,975 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000444074

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: SUGCT-008 OTTHUMT00000338395.2

Summary

Transcript-based displays