Transcript: TTLL6-005 OTTHUMT00000346941.3

Description

tubulin tyrosine ligase-like family, member 6

Location

Chromosome 17: 48,762,243-48,817,077 reverse strand.

About this transcript

This transcript has 14 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000156978 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TTLL6-003	OTTHUMT00000346939.3	3551	891aa	OTTHUMP00000211215	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45724	Q8N841
TTLL6-001	OTTHUMT00000346937.4	2548	584aa	OTTHUMP00000211213	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11537	-
TTLL6-005	OTTHUMT00000346941.3	3371	185aa	OTTHUMP00000211216	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TTLL6-002	OTTHUMT00000346938.2	1928	208aa	OTTHUMP00000211214	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8W9N0
TTLL6-006	OTTHUMT00000346942.2	580	48aa	OTTHUMP00000211217	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TTLL6-008	OTTHUMT00000346944.2	543	27aa	OTTHUMP00000211218	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TTLL6-007	OTTHUMT00000346943.3	479	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TTLL6-004	OTTHUMT00000346940.2	4440	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TTLL6-010	OTTHUMT00000360896.1	578	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 3,371 bps Translation length: 185 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 10/02/2009)

Alternative symbols

RP11-463M16.1-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 48,762,243-48,817,077 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000376681

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TTLL6-005 OTTHUMT00000346941.3

Summary

Transcript-based displays