Transcript: C6orf1-002 OTTHUMT00000357430.2

Description

chromosome 6 open reading frame 1

Location

Chromosome 6: 34,246,395-34,249,055 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000159754 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
C6orf1-001	OTTHUMT00000357175.2	1297	102aa	OTTHUMP00000216380	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q86T20
C6orf1-004	OTTHUMT00000357432.2	1053	102aa	OTTHUMP00000216552	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q86T20
C6orf1-006	OTTHUMT00000357434.2	903	82aa	OTTHUMP00000216553	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q86T20
C6orf1-003	OTTHUMT00000357431.2	792	82aa	OTTHUMP00000216551	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q86T20
C6orf1-002	OTTHUMT00000357430.2	1093	51aa	OTTHUMP00000216550	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G8JLJ3
C6orf1-008	OTTHUMT00000357436.2	806	51aa	OTTHUMP00000216554	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G8JLJ3
C6orf1-005	OTTHUMT00000357433.2	1487	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
C6orf1-007	OTTHUMT00000357435.1	911	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,093 bps Translation length: 51 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 16/09/2015 (Created on 30/06/2009)

Alternative symbols

RP11-513I15.7-002

Other assemblies

This transcript maps to 34,246,395-34,249,055 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000637920

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: C6orf1-002 OTTHUMT00000357430.2

Summary

Transcript-based displays