Transcript: PHAX-001 OTTHUMT00000250924.1

Description

phosphorylated adaptor for RNA export

Location

Chromosome 5: 126,600,268-126,627,252 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000163273 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
PHAX-001	OTTHUMT00000250924.1	4288	394aa	OTTHUMP00000159192	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4138	Q9H814
PHAX-003	OTTHUMT00000371426.1	2903	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PHAX-002	OTTHUMT00000371425.1	867	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PHAX-006	OTTHUMT00000372432.1	625	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PHAX-005	OTTHUMT00000371428.1	1003	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PHAX-007	OTTHUMT00000372433.1	847	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PHAX-004	OTTHUMT00000371427.1	828	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 4,288 bps Translation length: 394 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4138

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 27/10/2005)

Alternative symbols

AC099513.1-001

Other assemblies

This transcript maps to 126,600,268-126,627,252 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000297540

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PHAX-001 OTTHUMT00000250924.1

Summary

Transcript-based displays