Transcript: SLC30A8-001 OTTHUMT00000381204.2

Description

solute carrier family 30 (zinc transporter), member 8

Location

Chromosome 8: 117,135,259-117,176,714 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000164962 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC30A8-001	OTTHUMT00000381204.2	5242	320aa	OTTHUMP00000228051	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55272	-
SLC30A8-002	OTTHUMT00000381205.1	2520	369aa	OTTHUMP00000228052	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6322	Q8IWU4
SLC30A8-003	OTTHUMT00000381197.1	1393	320aa	OTTHUMP00000228049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55272	-
SLC30A8-006	OTTHUMT00000381201.3	823	52aa	OTTHUMP00000277754	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC30A8-007	OTTHUMT00000381202.3	587	36aa	OTTHUMP00000277755	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC30A8-005	OTTHUMT00000381198.2	549	87aa	OTTHUMP00000228050	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RG87	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC30A8-004	OTTHUMT00000381200.1	5415	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLC30A8-009	OTTHUMT00000381199.1	549	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC30A8-008	OTTHUMT00000381203.1	585	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 5,242 bps Translation length: 320 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55272

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 04/04/2014 (Created on 07/04/2010)

Alternative symbols

RP11-1059L18.2-001

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 117,135,259-117,176,714 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000519688

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SLC30A8-001 OTTHUMT00000381204.2

Summary

Transcript-based displays