Transcript: HGH1-001 OTTHUMT00000382922.1

Description

HGH1 homolog (S. cerevisiae)

Location

Chromosome 8: 144,137,769-144,140,843 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000165246 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
HGH1-001	OTTHUMT00000382922.1	2531	390aa	OTTHUMP00000229053	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6417	Q9BTY7
HGH1-002	OTTHUMT00000382925.1	2065	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
HGH1-003	OTTHUMT00000382923.1	2106	85aa	OTTHUMP00000229054	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
HGH1-007	OTTHUMT00000382924.1	702	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HGH1-004	OTTHUMT00000382928.1	1791	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HGH1-006	OTTHUMT00000382927.1	574	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HGH1-005	OTTHUMT00000382926.1	543	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,531 bps Translation length: 390 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6417

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/04/2010)

Alternative symbols

RP11-714N16.5-001

Other assemblies

This transcript maps to 144,137,769-144,140,843 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000347708

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HGH1-001 OTTHUMT00000382922.1

Summary

Transcript-based displays