Transcript: CHKB-CPT1B-001 OTTHUMT00000388890.1

Description

CHKB-CPT1B readthrough (NMD candidate)

Location

About this transcript

This transcript has 23 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CHKB-CPT1B-001	OTTHUMT00000388890.1	2816	60aa	OTTHUMP00000232465	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BT56	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CHKB-CPT1B-002	OTTHUMT00000317601.2	546	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CHKB-CPT1B-003	OTTHUMT00000268188.3	4906	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 23 Transcript length: 2,816 bps Translation length: 60 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 29/06/2010)

Alternative symbols

CTA-384D8.32-001

Annotation Attributes

readthrough [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 50,568,995-50,579,752 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000453634

Curation Method

Manual annotation from Havana