Transcript: PRDM11-008 OTTHUMT00000492313.1

Description

PR domain containing 11

Location

Chromosome 11: 45,147,343-45,235,110 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000166478 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRDM11-008	OTTHUMT00000492313.1	10730	1177aa	OTTHUMP00000283763	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73277	-
PRDM11-002	OTTHUMT00000389930.1	1858	477aa	OTTHUMP00000232977	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58130	-
PRDM11-005	OTTHUMT00000389931.2	3111	480aa	OTTHUMP00000253841	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BSZ2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PRDM11-001	OTTHUMT00000389928.2	1536	511aa	OTTHUMP00000232975	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9NQV5
PRDM11-004	OTTHUMT00000389929.2	762	184aa	OTTHUMP00000232976	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PRDM11-003	OTTHUMT00000389927.1	2209	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PRDM11-007	OTTHUMT00000430431.2	1870	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PRDM11-006	OTTHUMT00000389932.1	652	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 8 Transcript length: 10,730 bps Translation length: 1,177 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS73277

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 22/08/2016 (Created on 22/08/2016)

Alternative symbols

CTD-2560E9.1-008

Annotation Attributes

RNA-Seq supported only [Definitions]

Other assemblies

This transcript maps to 45,147,343-45,235,110 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000622142

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PRDM11-008 OTTHUMT00000492313.1

Summary

Transcript-based displays