Transcript: GLI1-003 OTTHUMT00000394200.2

Description

GLI family zinc finger 1

Location

Chromosome 12: 57,463,692-57,472,059 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 31 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000167332 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GLI1-001	OTTHUMT00000394197.1	3613	1106aa	OTTHUMP00000235722	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8940	P08151
GLI1-003	OTTHUMT00000394200.2	3196	1065aa	OTTHUMP00000235724	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GLI1-004	OTTHUMT00000394195.2	784	175aa	OTTHUMP00000235721	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PIB9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GLI1-005	OTTHUMT00000394198.2	480	129aa	OTTHUMP00000235723	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PQQ1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GLI1-002	OTTHUMT00000394196.1	2021	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
GLI1-007	OTTHUMT00000394201.1	676	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
GLI1-006	OTTHUMT00000394199.1	314	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 3,196 bps Translation length: 1,065 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 19/08/2010)

Alternative symbols

RP11-181L23.1-003

Remarks

NP_001161081.1

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 57,463,692-57,472,059 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000528467

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: GLI1-003 OTTHUMT00000394200.2

Summary

Transcript-based displays