Transcript: CNTN5-006 OTTHUMT00000395253.1

Description

contactin 5

Location

Chromosome 11: 99,021,190-100,356,566 forward strand.

About this transcript

This transcript has 24 exons and is annotated with 59 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000167579 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
CNTN5-001	OTTHUMT00000395148.2	6258	1100aa	OTTHUMP00000236213	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53696	O94779
CNTN5-003	OTTHUMT00000395147.2	4303	911aa	OTTHUMP00000236212	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58168	-
CNTN5-006	OTTHUMT00000395253.1	3800	1100aa	OTTHUMP00000236286	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53696	O94779
CNTN5-004	OTTHUMT00000395149.1	3679	1026aa	OTTHUMP00000236214	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53697	-
CNTN5-005	OTTHUMT00000395150.2	1620	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CNTN5-007	OTTHUMT00000395252.1	572	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CNTN5-009	OTTHUMT00000395255.1	474	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CNTN5-008	OTTHUMT00000395254.1	246	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CNTN5-002	OTTHUMT00000395146.2	3144	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CNTN5-010	OTTHUMT00000395256.1	553	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 24 Transcript length: 3,800 bps Translation length: 1,100 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS53696

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 01/09/2010)

Alternative symbols

RP11-49M9.1-006

Annotation Attributes

dotter confirmed [Definitions]

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 99,021,190-100,356,566 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000528682

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CNTN5-006 OTTHUMT00000395253.1

Summary

Transcript-based displays