Transcript: ACSS3-001 OTTHUMT00000407794.2

Description

acyl-CoA synthetase short-chain family member 3

Location

Chromosome 12: 81,077,211-81,261,205 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000170179 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ACSS3-001	OTTHUMT00000407794.2	9254	686aa	OTTHUMP00000243129	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9022	Q9H6R3
ACSS3-002	OTTHUMT00000407795.1	2666	685aa	OTTHUMP00000243130	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81716	A0A0B4J1R2
ACSS3-007	OTTHUMT00000407793.2	534	93aa	OTTHUMP00000243128	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VZB4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ACSS3-006	OTTHUMT00000407799.1	379	75aa	OTTHUMP00000243132	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YII9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ACSS3-008	OTTHUMT00000474703.1	3833	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ACSS3-003	OTTHUMT00000407797.2	2214	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ACSS3-005	OTTHUMT00000407798.1	864	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ACSS3-004	OTTHUMT00000407796.1	741	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 9,254 bps Translation length: 686 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9022

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 10/02/2011)

Alternative symbols

RP11-121G22.1-001

Other assemblies

This transcript maps to 81,077,211-81,261,205 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000548058

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: ACSS3-001 OTTHUMT00000407794.2

Summary

Transcript-based displays