Transcript: NRDE2-001 OTTHUMT00000411264.2

Description

NRDE-2, necessary for RNA interference, domain containing

Location

Chromosome 14: 90,267,856-90,332,137 reverse strand.

About this transcript

This transcript has 14 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000171020 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
NRDE2-001	OTTHUMT00000411264.2	14208	1164aa	OTTHUMP00000244901	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9890	Q9H7Z3
NRDE2-007	OTTHUMT00000411268.2	612	204aa	OTTHUMP00000244904	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
NRDE2-002	OTTHUMT00000411266.1	3434	43aa	OTTHUMP00000244903	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
NRDE2-003	OTTHUMT00000411265.1	2937	227aa	OTTHUMP00000244902	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
NRDE2-005	OTTHUMT00000411270.1	580	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NRDE2-006	OTTHUMT00000411269.1	577	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NRDE2-009	OTTHUMT00000476303.1	3538	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
NRDE2-004	OTTHUMT00000411267.1	1384	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
NRDE2-008	OTTHUMT00000411344.1	623	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 14,208 bps Translation length: 1,164 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9890

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 18/03/2011)

Alternative symbols

RP11-439L12.3-001

Other assemblies

This transcript maps to 90,267,856-90,332,137 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000354366

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: NRDE2-001 OTTHUMT00000411264.2

Summary

Transcript-based displays