Transcript: LIN52-001 OTTHUMT00000412316.3

Description

lin-52 homolog (C. elegans)

Location

About this transcript

This transcript has 6 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LIN52-001	OTTHUMT00000412316.3	2776	116aa	OTTHUMP00000245434	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32120	Q52LA3
LIN52-003	OTTHUMT00000412317.2	566	97aa	OTTHUMP00000245435	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V5T8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LIN52-004	OTTHUMT00000412319.1	585	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIN52-002	OTTHUMT00000412318.1	2339	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LIN52-005	OTTHUMT00000412320.1	271	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,776 bps Translation length: 116 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32120

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 01/04/2011)

Alternative symbols

RP5-892G5.1-001

Remarks

upstream ATG

Other assemblies

This transcript maps to 74,084,796-74,201,235 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000555028

Curation Method

Manual annotation from Havana