Transcript: VTI1B-003 OTTHUMT00000412658.1

Description

vesicle transport through interaction with t-SNAREs homolog 1B (yeast)

Location

About this transcript

This transcript has 3 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
VTI1B-001	OTTHUMT00000412558.2	5351	232aa	OTTHUMP00000245581	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9786	Q9UEU0
VTI1B-005	OTTHUMT00000412655.1	576	103aa	OTTHUMP00000245651	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
VTI1B-006	OTTHUMT00000412659.1	565	128aa	OTTHUMP00000245654	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
VTI1B-002	OTTHUMT00000412656.1	1103	44aa	OTTHUMP00000245652	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
VTI1B-003	OTTHUMT00000412658.1	718	59aa	OTTHUMP00000245653	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
VTI1B-004	OTTHUMT00000412657.1	574	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 718 bps Translation length: 59 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 05/04/2011)

Alternative symbols

RP11-1012A1.3-003

Other assemblies

This transcript maps to 67,656,510-67,674,820 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000555543

Curation Method

Manual annotation from Havana