Transcript: MTFMT-005 OTTHUMT00000418157.2

Description

mitochondrial methionyl-tRNA formyltransferase

Location

Chromosome 15: 65,002,996-65,029,598 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000172371 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
MTFMT-001	OTTHUMT00000418155.2	2734	389aa	OTTHUMP00000248255	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45280	Q96DP5
MTFMT-003	OTTHUMT00000418156.1	1522	389aa	OTTHUMP00000248256	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS45280	Q96DP5
MTFMT-002	OTTHUMT00000418158.1	1216	144aa	OTTHUMP00000248257	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
MTFMT-005	OTTHUMT00000418157.2	1111	134aa	OTTHUMP00000255395	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BTN9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
MTFMT-006	OTTHUMT00000418160.1	204	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
MTFMT-004	OTTHUMT00000418159.1	852	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
MTFMT-007	OTTHUMT00000418161.1	421	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,111 bps Translation length: 134 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 21/06/2011)

Alternative symbols

RP11-325L12.1-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 65,002,996-65,029,598 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000560717

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: MTFMT-005 OTTHUMT00000418157.2

Summary

Transcript-based displays