Transcript: ARMC5-004 OTTHUMT00000432850.1

Description

armadillo repeat containing 5

Location

Chromosome 16: 31,459,961-31,467,165 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000176618 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARMC5-002	OTTHUMT00000432846.1	4844	725aa	OTTHUMP00000254649	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS42155	-
ARMC5-001	OTTHUMT00000432845.1	3626	1030aa	OTTHUMP00000254648	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73874	-
ARMC5-003	OTTHUMT00000432847.1	3549	935aa	OTTHUMP00000254650	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45472	Q96C12
ARMC5-004	OTTHUMT00000432850.1	2072	598aa	OTTHUMP00000254652	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARMC5-005	OTTHUMT00000432848.1	3020	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ARMC5-006	OTTHUMT00000432849.3	586	10aa	OTTHUMP00000258860	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARMC5-007	OTTHUMT00000432851.2	723	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,072 bps Translation length: 598 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 02/09/2011)

Alternative symbols

RP11-452L6.4-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 31,459,961-31,467,165 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000564900

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ARMC5-004 OTTHUMT00000432850.1

Summary

Transcript-based displays